default outlier scan function

default outlier scan function

Usage

filter_remove_outlier_scans_default(sc_mzml)

Arguments

sc_mzml

the sc_mzml object

Value

SCmzml

Details

This is the default filtering and removing outliers function. It is based on the Moseley groups normal samples and experience. However, it does not reflect everyone's experience and needs. We expect that others have different use cases and needs, and therefore they should create their own function and use it appropriately.

Please examine this function and write your own as needed. It should at the very least take a SCmzml object, work on the scan_info slot, and then create a column with the name "keep" denoting which scans to keep. To view the current definition, you can do filter_remove_outlier_scans_default