do binomial testing
Usage
binomial_feature_enrichment(
binomial_features,
p_expected = 0.5,
direction = "two.sided",
p_adjust = "BH",
conf_level = 0.95,
min_features = 1
)Arguments
- binomial_features
a binomial_features object
- p_expected
the expected probability (default 0.5)
- direction
which direction to do the enrichment (two.sided, less, greater)
- p_adjust
how to correct the p-values (default is "BH")
- conf_level
the confidence level for the confidence interval (default is 0.95)
- min_features
a minimum number of features that are annotated to each annotation