Index

A

ABORTED_PULL_RESULTS_PATH (kegg_pull.pull.AbstractMultiplePull attribute) AbstractConvKEGGurl (class in kegg_pull.kegg_url)

AbstractKEGGurl (class in kegg_pull.kegg_url) AbstractLinkKEGGurl (class in kegg_pull.kegg_url) AbstractMultiplePull (class in kegg_pull.pull)

C

children (kegg_pull.pathway_organizer.HierarchyNode attribute)

combine_mappings() (in module kegg_pull.map)

D

database_conv() (in module kegg_pull.map) (kegg_pull.rest.KEGGrest method) database_link() (in module kegg_pull.map) (kegg_pull.rest.KEGGrest method)

DatabaseConvKEGGurl (class in kegg_pull.kegg_url) DatabaseLinkKEGGurl (class in kegg_pull.kegg_url) ddi() (kegg_pull.rest.KEGGrest method) DdiKEGGurl (class in kegg_pull.kegg_url)

E

entries_conv() (in module kegg_pull.map) (kegg_pull.rest.KEGGrest method) entries_link() (in module kegg_pull.map) (kegg_pull.rest.KEGGrest method)

EntriesConvKEGGurl (class in kegg_pull.kegg_url) EntriesLinkKEGGurl (class in kegg_pull.kegg_url) entry_id (kegg_pull.pathway_organizer.HierarchyNode attribute)

F

FAILED (kegg_pull.rest.KEGGresponse.Status attribute) failed_entry_ids (kegg_pull.pull.PullResult property) from_database() (in module kegg_pull.entry_ids)

from_file() (in module kegg_pull.entry_ids) from_keywords() (in module kegg_pull.entry_ids) from_molecular_attribute() (in module kegg_pull.entry_ids)

G

get() (kegg_pull.rest.KEGGrest method)

GetKEGGurl (class in kegg_pull.kegg_url)

H

HierarchyNode (class in kegg_pull.pathway_organizer)

I

indirect_link() (in module kegg_pull.map) info() (kegg_pull.rest.KEGGrest method)

InfoKEGGurl (class in kegg_pull.kegg_url) is_binary() (kegg_pull.kegg_url.GetKEGGurl static method)

K

kegg_pull module kegg_pull.entry_ids module kegg_pull.kegg_url module kegg_pull.map module kegg_pull.pathway_organizer module

kegg_pull.pull module kegg_pull.rest module KEGGresponse (class in kegg_pull.rest) KEGGresponse.Status (class in kegg_pull.rest) KEGGrest (class in kegg_pull.rest) keywords_find() (kegg_pull.rest.KEGGrest method) KeywordsFindKEGGurl (class in kegg_pull.kegg_url)

L

level (kegg_pull.pathway_organizer.HierarchyNode attribute) list() (kegg_pull.rest.KEGGrest method) ListKEGGurl (class in kegg_pull.kegg_url)

load_from_json() (in module kegg_pull.map) (kegg_pull.pathway_organizer.PathwayOrganizer static method) load_from_kegg() (kegg_pull.pathway_organizer.PathwayOrganizer static method)

M

MAX_ENTRY_IDS_PER_URL (kegg_pull.kegg_url.GetKEGGurl attribute) module kegg_pull kegg_pull.entry_ids kegg_pull.kegg_url kegg_pull.map kegg_pull.pathway_organizer kegg_pull.pull kegg_pull.rest

molecular_find() (kegg_pull.rest.KEGGrest method) MolecularFindKEGGurl (class in kegg_pull.kegg_url) multiple_entry_ids (kegg_pull.kegg_url.GetKEGGurl property) MultiProcessMultiplePull (class in kegg_pull.pull)

N

name (kegg_pull.pathway_organizer.HierarchyNode attribute)

O

only_one_entry() (kegg_pull.kegg_url.GetKEGGurl static method)

P

parent (kegg_pull.pathway_organizer.HierarchyNode attribute) PathwayOrganizer (class in kegg_pull.pathway_organizer) pull() (kegg_pull.pull.AbstractMultiplePull method) (kegg_pull.pull.SinglePull method)

pull_dict() (kegg_pull.pull.AbstractMultiplePull method) (kegg_pull.pull.SinglePull method) PullResult (class in kegg_pull.pull)

R

request() (kegg_pull.rest.KEGGrest method)

request_and_check_error() (in module kegg_pull.rest) reverse() (in module kegg_pull.map)

S

save_to_json() (in module kegg_pull.map) (kegg_pull.pathway_organizer.PathwayOrganizer method) SingleProcessMultiplePull (class in kegg_pull.pull)

SinglePull (class in kegg_pull.pull) SUCCESS (kegg_pull.rest.KEGGresponse.Status attribute) successful_entry_ids (kegg_pull.pull.PullResult property)

T

test() (kegg_pull.rest.KEGGrest method) timed_out_entry_ids (kegg_pull.pull.PullResult property)

TIMEOUT (kegg_pull.rest.KEGGresponse.Status attribute) to_json_string() (in module kegg_pull.map)