Welcome to kegg_pull’s documentation!

Contents:

• Guide
  • kegg_pull
• Tutorial
  • API
  • CLI
• CLI
  • kegg_pull Commandline Interface
  • Pulling, Parsing, and Saving KEGG Entries
  • Pulling Lists of KEGG Entry IDs
  • Constructing Mappings From KEGG “link” And “conv” Operations
  • Flattening A Pathways Brite Hierarchy
  • KEGG REST API Operations
• API
  • Pulling, Parsing, and Saving KEGG Entries
  • PullResult
  • SinglePull
  • AbstractMultiplePull
  • SingleProcessMultiplePull
  • MultiProcessMultiplePull
  • Pulling Lists of KEGG Entry IDs
  • from_database()
  • from_file()
  • from_keywords()
  • from_molecular_attribute()
  • Constructing Mappings From KEGG “link” And “conv” Operations
  • database_link()
  • database_conv()
  • entries_link()
  • entries_conv()
  • indirect_link()
  • combine_mappings()
  • reverse()
  • to_json_string()
  • save_to_json()
  • load_from_json()
  • Flattening A Pathways Brite Hierarchy
  • HierarchyNode
  • PathwayOrganizer
  • KEGG REST API Operations
  • KEGGresponse
  • KEGGrest
  • request_and_check_error()
  • Constructing URLs for the KEGG REST API
  • AbstractKEGGurl
  • ListKEGGurl
  • InfoKEGGurl
  • GetKEGGurl
  • KeywordsFindKEGGurl
  • MolecularFindKEGGurl
  • AbstractConvKEGGurl
  • DatabaseConvKEGGurl
  • EntriesConvKEGGurl
  • AbstractLinkKEGGurl
  • DatabaseLinkKEGGurl
  • EntriesLinkKEGGurl
  • DdiKEGGurl
• License

Indices and tables

• Index

• Module Index